STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F7D1Acyl-CoA N-acyltransferase. (174 aa)    
Predicted Functional Partners:
A0A1Y2EQR3
Mak10 subunit, NatC N-terminal acetyltransferase-domain-containing protein.
   
 0.998
A0A1Y2FDB7
Sm domain-containing protein.
    
 0.969
A0A1Y2FUV5
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.956
A0A1Y2EVE9
Sm domain-containing protein.
    
 0.807
A0A1Y2FKF6
Aspartate aminotransferase.
     
 0.747
A0A1Y2F0J9
Argininosuccinate synthetase.
   
 
  0.745
A0A1Y2FVP0
Glutamine amidotransferase type-2 domain-containing protein.
     
 0.743
A0A1Y2F3R1
Asparagine synthase-domain-containing protein.
     
 0.577
A0A1Y2FDY2
Aspartate aminotransferase.
   
 
 0.577
A0A1Y2FIE3
Aspartate aminotransferase.
   
 
 0.577
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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