STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F9D6Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (334 aa)    
Predicted Functional Partners:
A0A1Y2FJU8
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
  
 
 
0.992
A0A1Y2F913
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.989
A0A1Y2FAV4
Ribosomal RNA-processing protein 7-domain-containing protein.
    
 0.970
A0A1Y2EQP9
U3 small nucleolar RNA-associated protein 22.
   
 0.966
A0A1Y2F1D4
WD_REPEATS_REGION domain-containing protein.
   
 
 0.958
A0A1Y2F585
FACT complex component Spt16.
    
  0.931
A0A1Y2FAW3
Putative IMP3-component of the U3 small nucleolar ribonucleo protein.
   
   0.920
A0A1Y2EZH3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.919
A0A1Y2F8X8
U3 small nucleolar RNA-associated protein.
    
   0.919
A0A1Y2FBS9
RNA helicase.
   
   0.919
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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