STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F9F2Amino acid permease/ SLC12A domain-containing protein. (539 aa)    
Predicted Functional Partners:
A0A1Y2F0P7
Fe2OG dioxygenase domain-containing protein.
   
 0.570
A0A1Y2F0U9
Glycoside hydrolase family 13 protein.
 
 
 0.570
A0A1Y2F1I0
Fe2OG dioxygenase domain-containing protein.
   
 0.570
A0A1Y2FV76
Maltase malt.
 
 
 0.570
A0A1Y2FDJ1
DHQ_synthase domain-containing protein.
   
 0.567
A0A1Y2FTB2
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.567
A0A1Y2F0F3
Glycoside hydrolase superfamily.
   
 0.566
A0A1Y2F2T9
Cell wall alpha-1,3-glucan synthase ags1.
   
 0.566
A0A1Y2FUM6
Glycoside hydrolase superfamily.
   
 0.566
A0A1Y2FUP7
Glycoside hydrolase superfamily.
 
 
 0.566
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.