STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FAQ1tRNA synthetases class I, catalytic domain-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (812 aa)    
Predicted Functional Partners:
A0A1Y2FP29
AA_TRNA_LIGASE_II domain-containing protein.
 
 0.995
A0A1Y2FAC7
tRNA-binding domain-containing protein.
 
 0.985
A0A1Y2FT17
Tyrosine--tRNA ligase.
 
 0.985
A0A1Y2FNP3
tRNA synthetases class I-domain-containing protein.
  
 0.983
A0A1Y2ERB1
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.980
A0A1Y2FAL4
Putative glutamyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.980
A0A1Y2FER5
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.977
A0A1Y2FHN1
tRNA synthetases class I (M)-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.975
A0A1Y2F919
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.955
A0A1Y2FAL9
Ribosomal protein, large subunit.
   
 0.955
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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