STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FC22Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (314 aa)    
Predicted Functional Partners:
A0A1Y2EZA5
Rab geranylgeranyltransferase alpha subunit.
    
 0.999
A0A1Y2FLX9
Snare Ykt6; Belongs to the synaptobrevin family.
    
 
 0.885
A0A1Y2ERG9
Ras family-domain-containing protein.
    
 0.884
A0A1Y2FF94
Uncharacterized protein.
   
 0.811
A0A1Y2F408
Ras family-domain-containing protein.
    
 0.805
A0A1Y2FRZ4
ATP synthase regulation protein NCA2-domain-containing protein.
    
 0.799
A0A1Y2FTB3
Putative rab GTPase SrgA.
    
 0.799
A0A1Y2FUG6
Small GTPase superfamily.
    
 0.798
A0A1Y2F5J6
Ras family-domain-containing protein.
    
 0.775
A0A1Y2FI59
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.773
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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