STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FC49Uncharacterized protein. (645 aa)    
Predicted Functional Partners:
A0A1Y2FQB7
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.992
A0A1Y2FUL7
Actin family; Belongs to the actin family.
   
 0.984
A0A1Y2FPU7
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.983
A0A1Y2FQ72
Actin family; Belongs to the actin family.
   
 0.981
A0A1Y2F7R9
WD40-repeat-containing domain protein.
   
 0.977
A0A1Y2FLI0
DUF2013 domain-containing protein.
    
 0.953
A0A1Y2EZF5
Pectin lyase fold/virulence factor; Belongs to the glycosyl hydrolase 28 family.
    
 0.785
A0A1Y2FI17
Pectin lyase fold/virulence factor; Belongs to the glycosyl hydrolase 28 family.
    
 0.785
A0A1Y2FUP3
Uncharacterized protein.
    
 0.785
A0A1Y2EVI1
Uncharacterized protein.
   
 0.763
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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