STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FC75Formyl transferase. (355 aa)    
Predicted Functional Partners:
A0A1Y2FD82
Uncharacterized protein.
  
 
 0.939
A0A1Y2FK34
Thymidylate synthase/dCMP hydroxymethylase domain-containing protein.
  
 
 0.917
A0A1Y2EZ02
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 
 0.913
A0A1Y2F485
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.908
A0A1Y2F0L4
Formate-tetrahydrofolate ligase.
    
 0.894
A0A1Y2EZP2
Serine hydrolase-domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
 0.885
A0A1Y2FC90
Serine hydrolase FSH.
  
 
 0.885
A0A1Y2FI79
Serine hydrolase FSH.
  
 
 0.885
A0A1Y2FHN1
tRNA synthetases class I (M)-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.876
A0A1Y2FY40
tRNA synthetases class I (M)-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.868
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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