STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FD7340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)    
Predicted Functional Partners:
A0A1Y2ESP9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
A0A1Y2EWP2
40S ribosomal protein S29.
   
 0.999
A0A1Y2F097
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.999
A0A1Y2F1B0
Elongation factor 3, variant 1.
   
 
 0.999
A0A1Y2F1J4
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
A0A1Y2F2Z6
40S ribosomal protein S27.
   
 0.999
A0A1Y2F5H0
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
A0A1Y2F7T5
Ribosomal protein S10 domain-containing protein.
   
 0.999
A0A1Y2F9A6
40S ribosomal protein S19-B.
   
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.