STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FDF6Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
A0A1Y2FKB0
Guanine-1-methyltransferase-domain-containing protein.
    
 0.964
A0A1Y2FUI4
ClpP/crotonase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.954
A0A1Y2FBY9
Dynein heavy chain, cytosolic.
 
      0.899
A0A1Y2F2K6
Mate-domain-containing protein.
    
 0.866
A0A1Y2F985
Mate-domain-containing protein.
    
 0.866
A0A1Y2FC10
ClpP/crotonase.
   
 0.827
A0A1Y2FQK7
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.814
A0A1Y2EXJ4
Uncharacterized protein.
   
 0.751
A0A1Y2F847
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.751
A0A1Y2FL10
ETF domain-containing protein.
   
  
 0.733
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.