STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FDP73-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate. (309 aa)    
Predicted Functional Partners:
A0A1Y2FHE8
Pantoate/beta-alanine ligase.
 
 0.999
A0A1Y2FFJ8
Dihydroxy-acid/6-phosphogluconate dehydratase.
     
 0.908
A0A1Y2EV33
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
 0.890
A0A1Y2FDN1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
     
 0.873
A0A1Y2FEX3
Putative branched-chain amino acid aminotransferase.
    
 0.824
A0A1Y2F0T6
3-mercaptopyruvate sulfurtransferase.
    
  0.731
A0A1Y2F6I3
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.691
A0A1Y2F1E6
Tryptophan synthase.
     
 0.638
A0A1Y2F2T0
Uncharacterized protein.
     
 0.633
A0A1Y2FMA1
Putative peptidase.
     
 0.633
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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