STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FDV5Phosphatidylethanolamine-binding protein. (198 aa)    
Predicted Functional Partners:
A0A1Y2F3E0
Translation protein SH3-like domain-containing protein.
   
 
 0.754
A0A1Y2F1F8
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.753
A0A1Y2FU37
Mitochondrial 54S ribosomal protein YmL47; Belongs to the universal ribosomal protein uL16 family.
   
 0.749
A0A1Y2F7P2
Mitochondrial ribosomal protein L28-domain-containing protein.
   
 
 0.742
A0A1Y2FSQ1
Ribosomal protein S5, C-terminal domain-domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.723
A0A1Y2EWA8
Ribosomal protein L4/L1e.
   
 
 0.722
A0A1Y2FRZ7
Uncharacterized protein.
   
 
 0.722
A0A1Y2FH59
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.721
A0A1Y2FT12
Translation protein SH3-like domain-containing protein.
   
 
 0.713
A0A1Y2FIM5
50S ribosomal protein L13.
   
 
 0.709
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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