STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FET5DEP domain-containing protein. (1605 aa)    
Predicted Functional Partners:
A0A1Y2F2M7
Nitrogen permease regulator of amino acid transport activity 3-domain-containing protein.
    
 0.999
A0A1Y2FDX8
WD_REPEATS_REGION domain-containing protein.
   
 0.993
A0A1Y2FSG7
WD40-repeat-containing domain protein.
   
 0.993
A0A1Y2EZE0
Nitrogen permease regulator 2.
    
 0.992
A0A1Y2F996
WD40-repeat-containing domain protein.
    
 0.992
A0A1Y2EV44
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.982
A0A1Y2FUJ4
Ras-related GTP-binding protein A-like protein.
    
 0.982
A0A1Y2FIC2
Putative nucleoporin; Belongs to the WD repeat SEC13 family.
    
 0.981
A0A1Y2F2R6
Gtr1/RagA G protein Gtr2.
   
 0.972
A0A1Y2FH73
Peptidase S24/S26A/S26B/S26C.
    
 0.961
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.