STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FFK3Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (533 aa)    
Predicted Functional Partners:
A0A1Y2FH66
Uncharacterized protein.
   
 
 0.998
A0A1Y2F7P6
Fip1 motif-domain-containing protein.
   
 0.991
A0A1Y2FUX1
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.991
A0A1Y2F9M6
CPSF A subunit region-domain-containing protein.
    
 0.990
A0A1Y2FD92
DUF3453 domain-containing protein.
    
 0.990
A0A1Y2FTT3
Beta-lactamase-like protein.
   
 0.987
A0A1Y2FM58
WD40-repeat-containing domain protein.
   
 0.986
A0A1Y2F1U4
TPR_REGION domain-containing protein.
    
 0.978
A0A1Y2FDN4
RRM domain-containing protein.
    
 0.977
A0A1Y2FNB4
DWNN domain-domain-containing protein.
    
 
 0.956
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.