STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FHB7BHLH domain-containing protein. (401 aa)    
Predicted Functional Partners:
A0A1Y2EVG4
PLU-1-like protein-domain-containing protein.
   
 0.738
A0A1Y2FLH6
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
  0.672
A0A1Y2F557
Putative ubiquitin-specific processing protease 21; Belongs to the peptidase C19 family.
    
  0.668
A0A1Y2F5R7
Uncharacterized protein.
    
  0.668
A0A1Y2F6J4
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.668
A0A1Y2F1V1
Chromo domain-containing protein.
   
  0.663
A0A1Y2F2J6
Chromo domain-containing protein.
   
  0.663
A0A1Y2EZ43
BHLH domain-containing protein.
    
 0.650
A0A1Y2FNF9
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.624
A0A1Y2FF24
SET domain-containing protein.
    
  0.597
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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