STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FI3340 kDa putative membrane-spanning ATPase; Belongs to the AAA ATPase family. (364 aa)    
Predicted Functional Partners:
A0A1Y2FED9
NPL4 family-domain-containing protein.
   
 0.793
A0A1Y2F7S6
Soluble NSF attachment protein.
    
 0.790
A0A1Y2F528
Uncharacterized protein.
   
 0.781
A0A1Y2FGN8
C2H2-type domain-containing protein.
   
 0.777
A0A1Y2FK60
Pex19 protein family-domain-containing protein.
    
 0.777
A0A1Y2FSV9
Snf7 family.
   
 0.774
A0A1Y2FY75
UBX domain-containing protein.
    
 0.774
A0A1Y2FBU5
Peroxin 13, N-terminal region-domain-containing protein.
    
 0.765
A0A1Y2FC80
t-SNARE.
    
 0.765
A0A1Y2F5G5
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.764
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.