STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FI67P-loop containing nucleoside triphosphate hydrolase protein. (417 aa)    
Predicted Functional Partners:
A0A1Y2EYF4
3'-5' exonuclease domain-containing protein.
  
 0.999
A0A1Y2EYK6
Ribonuclease H-like domain-containing protein.
  
 0.999
A0A1Y2FK30
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
  
 0.982
A0A1Y2FI93
Putative DNA repair protein Mus81.
   
 0.973
A0A1Y2F7I0
DNA repair protein, SNF2 family.
  
 
 0.955
A0A1Y2FH70
SNF2 family N-terminal domain-domain-containing protein.
  
 
 0.948
A0A1Y2FIU3
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.938
A0A1Y2FQ92
Apoenzyme; Belongs to the MRE11/RAD32 family.
  
 0.937
A0A1Y2FBM6
SAP domain-containing protein.
   
 
 0.936
A0A1Y2F6F4
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.935
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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