STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FIM6Glycoside hydrolase. (364 aa)    
Predicted Functional Partners:
A0A1Y2FD80
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.858
A0A1Y2EW34
Cytochrome c oxidase.
   
 0.826
A0A1Y2ESR0
Cytochrome c oxidase, subunit VIa; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.759
A0A1Y2EVI6
COX5A-domain-containing protein.
   
 0.754
A0A1Y2F3Z6
Putative cytochrome c oxidase polypeptide 5, mitochondrial.
   
 0.736
A0A1Y2FAI9
BZIP domain-containing protein.
   
 0.704
A0A1Y2ETF7
Cytochrome c oxidase subunit VIIc.
   
 0.694
A0A1Y2EPK0
Glycoside hydrolase superfamily; Belongs to the glycosyl hydrolase 18 family.
     
 0.680
A0A1Y2FSG9
Glycoside hydrolase superfamily.
     
 0.680
A0A1Y2F1C0
Ymr244c-a-like protein.
   
 0.662
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.