STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FIU5Plasma membrane fusion protein PRM1; Involved in cell fusion during mating by stabilizing the plasma membrane fusion event; Belongs to the PRM1 family. (738 aa)    
Predicted Functional Partners:
A0A1Y2F6I3
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.838
A0A1Y2F742
Uncharacterized protein.
    
 0.663
A0A1Y2EUJ3
RNA polymerase III transcription factor IIIC subunit-domain-containing protein.
    
 0.661
A0A1Y2F1F8
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
   
  0.645
A0A1Y2F7T6
30S ribosomal protein S16.
   
  0.645
A0A1Y2FH59
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.645
A0A1Y2FQE9
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
  0.645
A0A1Y2EWH8
Ribosomal protein S10 domain-containing protein.
    
  0.643
A0A1Y2F1N2
Uncharacterized protein.
    
  0.643
A0A1Y2FC48
Uncharacterized protein.
    
  0.643
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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