STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FK51Putative polysaccharide deacetylase. (262 aa)    
Predicted Functional Partners:
A0A1Y2FI04
Uncharacterized protein.
    
 0.989
A0A1Y2FMF6
Integral peroxisomal membrane peroxin-domain-containing protein.
    
 0.983
A0A1Y2FH22
Polyubiquitin 10.
    
 0.934
BCR37DRAFT_195
Arginase; Belongs to the arginase family.
    
 
 0.905
A0A1Y2F832
PfkB family carbohydrate kinase.
   
 0.896
A0A1Y2FQ95
WD40-repeat-containing domain protein.
    
 0.894
A0A1Y2FQ92
Apoenzyme; Belongs to the MRE11/RAD32 family.
    
 0.879
A0A1Y2FNK9
RING-type domain-containing protein.
    
 0.874
A0A1Y2FKH7
GAF domain-containing protein.
    
 0.845
A0A1Y2F0K9
Zn_dep_PLPC domain-containing protein.
    
 0.829
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.