STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FLF5Pterin-4-alpha-carbinolamine dehydratase. (94 aa)    
Predicted Functional Partners:
A0A1Y2EX84
Spo7-like protein-domain-containing protein.
   
 
 0.737
A0A1Y2FBX3
Putative homogentisate 1,2-dioxygenase.
  
  
 0.735
A0A1Y2FKF6
Aspartate aminotransferase.
  
  
 0.678
A0A1Y2FLN6
Uncharacterized protein.
   
 
 0.597
A0A1Y2F2R1
Uncharacterized protein.
   
 
 0.545
A0A1Y2FK20
SCP2 sterol-binding domain-containing protein.
   
 
 0.545
A0A1Y2FM84
HAD-like domain-containing protein.
  
  
 0.518
A0A1Y2FDY2
Aspartate aminotransferase.
  
  
 0.514
A0A1Y2FIE3
Aspartate aminotransferase.
  
  
 0.514
A0A1Y2FGH6
Putative short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.504
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.