STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FLU3DNA polymerase epsilon catalytic subunit B, Dpb2. (611 aa)    
Predicted Functional Partners:
A0A1Y2FK92
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.999
A0A1Y2FT29
Histone-fold-containing protein.
    
 0.998
A0A1Y2FNA1
CDC45 family.
   
 0.993
A0A1Y2EQ01
DNA helicase; Belongs to the MCM family.
   
 0.990
A0A1Y2EXI0
DNA helicase; Belongs to the MCM family.
   
 0.989
A0A1Y2ETF6
DNA helicase; Belongs to the MCM family.
   
 0.987
A0A1Y2FBP4
DNA helicase; Belongs to the MCM family.
   
 0.986
A0A1Y2EYF4
3'-5' exonuclease domain-containing protein.
   
 
 0.983
A0A1Y2EYK6
Ribonuclease H-like domain-containing protein.
   
 
 0.983
A0A1Y2ETJ1
MCM2/3/5 family-domain-containing protein; Belongs to the MCM family.
   
 0.982
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.