STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FM95WD40-repeat-containing domain protein. (696 aa)    
Predicted Functional Partners:
A0A1Y2FED9
NPL4 family-domain-containing protein.
   
 
 0.962
A0A1Y2EWV8
Putative CDC48 ATPase; Belongs to the AAA ATPase family.
   
 
 0.961
A0A1Y2F7Q6
Ubiquitin fusion degradation protein UFD1-domain-containing protein.
   
 
 0.961
A0A1Y2FDX7
OTU domain-containing protein.
    
 
 0.961
A0A1Y2F528
Uncharacterized protein.
    
 
 0.959
A0A1Y2FH22
Polyubiquitin 10.
    
 0.929
A0A1Y2FQI0
UBX domain-domain-containing protein.
   
 
 0.926
A0A1Y2EVA4
Ubiquitin fusion degradation protein UFD1-domain-containing protein.
   
 
 0.921
A0A1Y2F6I8
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
 
 0.916
A0A1Y2FLW2
IPT/TIG domain-containing protein.
    
   0.884
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
Server load: low (28%) [HD]