STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FMU5L-Aspartase-like protein. (494 aa)    
Predicted Functional Partners:
A0A1Y2FDC4
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
 
 0.994
A0A1Y2FFH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.971
A0A1Y2ERK8
Malate dehydrogenase.
  
 0.966
A0A1Y2F103
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
   
 0.958
A0A1Y2FDW6
Uncharacterized protein.
   
 
 0.954
A0A1Y2F9R7
Putative OSM1-fumarate reductase.
  
 0.936
A0A1Y2FVF9
Malic enzyme.
  
 
 0.932
BCR37DRAFT_195
Arginase; Belongs to the arginase family.
 
   
 0.927
A0A1Y2FQ35
Lactate/malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.915
A0A1Y2F7Y5
Thiamin diphosphate-binding protein.
  
 
 0.911
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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