STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FNC1SMI1_KNR4 domain-containing protein. (518 aa)    
Predicted Functional Partners:
A0A1Y2EZF4
WD40-repeat-containing domain protein.
    
 0.684
A0A1Y2F8Q4
B30.2/SPRY domain-containing protein.
    
 0.678
A0A1Y2FWQ4
Kinase-like domain-containing protein.
    
 0.674
A0A1Y2EV15
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.671
A0A1Y2EW80
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.671
A0A1Y2EV44
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.670
A0A1Y2F5D8
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
    
 0.668
A0A1Y2FIC2
Putative nucleoporin; Belongs to the WD repeat SEC13 family.
    
 0.668
A0A1Y2EW32
Ubiquitin-related domain-containing protein.
    
  0.663
A0A1Y2FNY2
CPSF A subunit region-domain-containing protein.
    
 0.659
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.