STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FNQ1S1-like domain-containing protein. (137 aa)    
Predicted Functional Partners:
A0A1Y2FM82
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 
 0.898
A0A1Y2FM40
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.798
A0A1Y2F097
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
   0.786
A0A1Y2FFA3
Putative ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.
    
   0.786
A0A1Y2FM50
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
    
   0.630
A0A1Y2FDY9
B5 domain-containing protein.
   
 
 0.590
A0A1Y2FIT2
Guanine nucleotide-binding protein subunit beta-like protein.
    
   0.568
A0A1Y2FUV7
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
    
   0.568
A0A1Y2FD73
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.563
A0A1Y2FFK7
40S ribosomal protein S5-B.
   
   0.563
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.