STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FP12Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)    
Predicted Functional Partners:
A0A1Y2FAM2
ESCO1/2 acetyl-transferase-domain-containing protein.
   
 0.998
A0A1Y2FH13
UmuC domain-containing protein.
   
 0.998
A0A1Y2F8U8
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.990
A0A1Y2FF82
DNA-repair protein rad2.
   
 0.985
A0A1Y2FWJ7
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.982
A0A1Y2FQ28
Beta-lactamase-like protein.
   
 0.981
A0A1Y2FU79
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.977
A0A1Y2FV21
Muts domain V-domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 0.977
A0A1Y2FAG6
Replication factor C subunit 1.
   
 0.974
A0A1Y2FNX8
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.971
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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