STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FQ44Caulimovirus viroplasmin-domain-containing protein. (282 aa)    
Predicted Functional Partners:
A0A1Y2F457
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.952
A0A1Y2FK34
Thymidylate synthase/dCMP hydroxymethylase domain-containing protein.
    
 0.731
A0A1Y2FIK2
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.723
A0A1Y2FUL3
Nucleoside diphosphate kinase.
   
 
 0.705
A0A1Y2EV63
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.683
A0A1Y2ES36
Hydrolase, NUDIX family protein.
    
  0.680
A0A1Y2EQ57
ATP-NAD kinase-like domain-containing protein.
    
  0.602
A0A1Y2EQR2
ATP-NAD kinase-like domain-containing protein.
    
  0.602
A0A1Y2EWW0
DNA polymerase family A-domain-containing protein.
    
 0.591
A0A1Y2FGL2
Enolase, C-terminal TIM barrel domain-domain-containing protein.
    
  0.589
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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