STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FQD6Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (358 aa)    
Predicted Functional Partners:
A0A1Y2FIG6
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.989
A0A1Y2F386
CobW/HypB/UreG, nucleotide-binding domain-domain-containing protein.
    
 
 0.882
A0A1Y2EQ64
60S ribosomal protein L5.
  
 
 0.870
A0A1Y2EX74
Putative 60S ribosomal protein L35.
  
 
 0.868
A0A1Y2FCF0
60S ribosomal protein L7.
  
 
 0.864
A0A1Y2FNN4
Ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.855
A0A1Y2FRD2
Translation protein SH3-like domain-containing protein.
  
   0.850
A0A1Y2FDS5
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.831
A0A1Y2EV22
60S ribosomal protein L9.
  
 
 0.829
A0A1Y2F2Y9
Translation protein; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.829
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.