STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FQL6Karyopherin Kap95. (860 aa)    
Predicted Functional Partners:
A0A1Y2FBY3
Ergosterol biosynthesis ERG4/ERG24.
    
  0.999
A0A1Y2FQ59
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.999
A0A1Y2EY45
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.987
A0A1Y2F821
Importin-7.
   
 
 0.947
A0A1Y2F1T7
Uncharacterized protein.
   
 0.944
A0A1Y2ETE7
Pseudouridine synthase.
    
 
 0.919
A0A1Y2FGV0
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.919
A0A1Y2FBM1
Nsp1-like C-terminal region-domain-containing protein.
   
 0.914
A0A1Y2FWP9
Uncharacterized protein.
    
 
 0.910
A0A1Y2FLZ8
Nuclear cap-binding protein subunit 2.
   
 
 0.897
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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