STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FQS3BP28CT domain-containing protein. (1651 aa)    
Predicted Functional Partners:
A0A1Y2F113
Armadillo-type protein.
   
 0.999
A0A1Y2F1D4
WD_REPEATS_REGION domain-containing protein.
   
 0.999
A0A1Y2FAI6
WD40-repeat-containing domain protein.
   
 0.999
A0A1Y2FSS2
WD40-repeat-containing domain protein.
   
 0.999
A0A1Y2EQP9
U3 small nucleolar RNA-associated protein 22.
   
 0.998
A0A1Y2F6L5
Periodic tryptophan protein-like protein 2.
   
 0.998
A0A1Y2FQP9
Uncharacterized protein.
   
 0.998
A0A1Y2FUE7
WD40-repeat-containing domain protein.
   
 0.998
A0A1Y2EW29
Bms1-type G domain-containing protein.
   
 0.997
A0A1Y2F267
Nop domain-containing protein.
   
 0.997
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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