STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FQT5Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
A0A1Y2F3T5
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
   
 
 0.772
A0A1Y2F7B2
Uncharacterized protein.
   
 
 0.758
A0A1Y2FSC4
Sterol-4-alpha-carboxylate 3-dehydrogenase.
     
 0.755
A0A1Y2ERE5
Short-chain dehydrogenase/reductase SDR.
     
 0.748
A0A1Y2EPD9
NADP-dependent oxidoreductase domain-containing protein.
   
 
 0.686
A0A1Y2EXS3
NADP-dependent oxidoreductase domain-containing protein.
   
 
 0.686
A0A1Y2FKL0
PH domain-containing protein.
     
 0.587
A0A1Y2FU47
DNA glycosylase.
     
 0.587
A0A1Y2EWN0
Uncharacterized protein.
     
 0.586
A0A1Y2F5E4
Cytochrome P450; Belongs to the cytochrome P450 family.
     
 0.586
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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