STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FSW2Cytochrome c oxidase assembly protein COX16-domain-containing protein. (123 aa)    
Predicted Functional Partners:
A0A1Y2FER5
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.991
A0A1Y2F1B0
Elongation factor 3, variant 1.
   
 
 0.990
A0A1Y2FNN4
Ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family.
   
 0.979
A0A1Y2EQS9
Ribosomal protein L19e-domain-containing protein.
   
 0.977
A0A1Y2FRD2
Translation protein SH3-like domain-containing protein.
   
 0.977
A0A1Y2F846
60S ribosomal protein L14.
   
 0.976
A0A1Y2FES6
60S ribosomal protein L31e.
   
 0.975
A0A1Y2F7Z5
Component of cytosolic 80S ribosome and 60S large subunit.
   
 0.974
A0A1Y2FSI6
Ribosomal protein L24e-domain-containing protein.
   
 0.974
A0A1Y2FQC8
60S ribosomal protein L32.
   
 0.973
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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