STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FTE2CCAAT binding transcription factor component. (125 aa)    
Predicted Functional Partners:
A0A1Y2FAQ6
Nuclear transcription factor Y subunit B-3.
  
 0.997
A0A1Y2FQF6
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B-domain-containing protein.
    
 0.996
A0A1Y2FT29
Histone-fold-containing protein.
    
 0.965
A0A1Y2FK92
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.658
A0A1Y2FLU3
DNA polymerase epsilon catalytic subunit B, Dpb2.
     
 0.593
A0A1Y2EWQ9
Uncharacterized protein.
    
 
 0.578
A0A1Y2FH39
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.573
A0A1Y2FQA6
Uncharacterized protein.
    
 
 0.573
A0A1Y2F4K4
Cyclin-dependent protein kinase Cdk1/Cdc2; Belongs to the protein kinase superfamily.
   
 0.561
A0A1Y2F6A3
Cyclin-dependent kinase; Belongs to the protein kinase superfamily.
   
 0.561
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.