STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FTW0Cell differentiation family, Rcd1-like-domain-containing protein. (358 aa)    
Predicted Functional Partners:
A0A1Y2EV16
Uncharacterized protein.
    
 0.994
A0A1Y2FVL3
CCR4-Not complex component, Not1-domain-containing protein.
    
 0.994
A0A1Y2FXG1
Ribonuclease H-like domain-containing protein.
   
 0.993
A0A1Y2FG96
Endonuclease/exonuclease/phosphatase.
    
 0.988
A0A1Y2FII4
NOT2_3_5 domain-containing protein.
    
 0.985
A0A1Y2FIE0
CUE domain-containing protein.
    
 0.968
A0A1Y2ETD7
rRNA-processing arch domain-domain-containing protein.
   
 
 0.926
A0A1Y2FLV5
Uncharacterized protein.
    
   0.884
A0A1Y2FJV1
Fatty acid hydroxylase superfamily-domain-containing protein; Belongs to the sterol desaturase family.
 
      0.840
A0A1Y2F6A5
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]
   
 0.737
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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