STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FTZ8Mis12-Mtw1 protein family-domain-containing protein. (465 aa)    
Predicted Functional Partners:
A0A1Y2FV32
Chromosome segregation protein Spc25-domain-containing protein.
    
 0.966
A0A1Y2F7K6
Nuf2 family-domain-containing protein.
    
 0.953
A0A1Y2FSY4
Uncharacterized protein.
    
 
 0.945
A0A1Y2FNQ6
Uncharacterized protein.
    
 
 0.933
A0A1Y2FXI1
Spc7 kinetochore protein-domain-containing protein.
    
 
 0.925
A0A1Y2FJF5
Chromosome segregation protein Csm1/Pcs1-domain-containing protein.
    
 
 0.917
A0A1Y2FT79
HEC/Ndc80p family-domain-containing protein.
    
 0.866
A0A1Y2EME3
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.733
A0A1Y2FIL0
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.733
A0A1Y2FNJ4
Cleft lip and palate transmembrane 1.
    
 
 0.733
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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