STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FU55Rad60-SLD domain-containing protein. (448 aa)    
Predicted Functional Partners:
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.691
A0A1Y2ESR1
WD40-repeat-containing domain protein.
   
 0.682
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.676
A0A1Y2FR70
Alpha-actinin.
    
 0.668
A0A1Y2FMJ2
CLP1_P domain-containing protein.
    
  0.660
A0A1Y2FT43
Las1-like protein.
    
  0.649
A0A1Y2FIH9
Bacterial low temperature requirement A protein-domain-containing protein.
    
 0.638
A0A1Y2F6R3
WSC domain-domain-containing protein.
    
 0.617
A0A1Y2FQH6
Uncharacterized protein.
    
 0.617
A0A1Y2FNM0
Senp1 mutant in complex with sumo-1.
    
  0.616
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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