STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FUK2Ribosomal protein L22e. (122 aa)    
Predicted Functional Partners:
A0A1Y2F846
60S ribosomal protein L14.
   
 0.999
A0A1Y2FRD2
Translation protein SH3-like domain-containing protein.
   
 0.999
A0A1Y2ETU1
Ribosomal protein L21.
   
 0.998
A0A1Y2EV22
60S ribosomal protein L9.
   
 0.998
A0A1Y2EVX7
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.998
A0A1Y2EW02
Putative 60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family.
   
 0.998
A0A1Y2F4H1
Ribosomal protein L14 domain-containing protein; Belongs to the universal ribosomal protein uL14 family.
   
 0.998
A0A1Y2F827
Ribosomal protein YL16.
   
 0.998
A0A1Y2F9E9
60S ribosomal protein L34.
   
 0.998
A0A1Y2F9N0
60S ribosomal protein L2.
   
 0.998
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.