STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FUW3Uncharacterized protein. (236 aa)    
Predicted Functional Partners:
A0A1Y2EVE9
Sm domain-containing protein.
    
   0.999
A0A1Y2F2N6
Pre-mRNA splicing factor component-domain-containing protein.
    
 
 0.999
A0A1Y2F7E6
Uncharacterized protein.
    
   0.999
A0A1Y2F908
Small nuclear ribonucleoprotein G.
    
   0.999
A0A1Y2FAH6
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.999
A0A1Y2FAM5
PRP8 premRNA processing factor 8-like protein putative.
    
   0.999
A0A1Y2FAU3
WD40-repeat-containing domain protein.
    
   0.999
A0A1Y2FBQ3
Pre-mRNA-splicing factor syf1.
    
   0.999
A0A1Y2FU63
Prp19/Pso4-like-domain-containing protein.
    
   0.999
A0A1Y2FV16
WD40-repeat-containing domain protein.
    
 
 0.999
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.