STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FVE0Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (290 aa)    
Predicted Functional Partners:
A0A1Y2F2U6
Putative peroxisomal dehydratase.
 
 
 0.943
A0A1Y2ETC7
Acyl transferase/acyl hydrolase/lysophospholipase.
 
 0.888
A0A1Y2FM63
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.878
A0A1Y2FNG1
Dehydrogenase with different specificitie.
 
 
0.806
A0A1Y2F3T5
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
    
 0.775
A0A1Y2FFG8
Thioesterase-like superfamily-domain-containing protein.
    
 0.767
A0A1Y2FVF4
Putative membrane protein.
 
  
 
 0.629
A0A1Y2FH21
Uncharacterized protein.
   
 0.622
A0A1Y2FH45
Beta-lactamase-like protein.
   
 0.622
A0A1Y2FSW5
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.622
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.