STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FVR2RNA12 protein-domain-containing protein. (755 aa)    
Predicted Functional Partners:
A0A1Y2FLL8
PHD-type domain-containing protein.
    
 0.662
A0A1Y2FH76
Mitochondrial inner membrane i-AAA protease complex subunit Yme1.
    
 
 0.657
A0A1Y2F6I3
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.646
A0A1Y2EZG5
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.616
A0A1Y2F7Q7
DNA-directed RNA polymerase I.
    
  0.564
A0A1Y2FSN4
RNA polymerase II.
    
  0.564
A0A1Y2FQ28
Beta-lactamase-like protein.
    
 0.563
A0A1Y2FA43
DNA-directed RNA polymerase.
    
  0.559
A0A1Y2FF89
DNA repair metallo-beta-lactamase-domain-containing protein.
    
 0.559
A0A1Y2FTT3
Beta-lactamase-like protein.
    
 0.559
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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