Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GACE_0076Asparagine synthase. (269 aa)    
Predicted Functional Partners:
GACE_0555
1-(5-Phosphoribosyl)-5-amino-4-imidazole- carboxylate(AIR) carboxylase.
 
  
 0.974
GACE_0061
Hypothetical protein; Belongs to the LarC family.
  
 0.954
GACE_1873
Endonuclease III.
 
    0.774
GACE_0625
Substrate-specific component NikM of nickel ECF transporter.
 
    0.690
GACE_1809
Hypothetical protein.
       0.670
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
  
    0.634
cbiM
Substrate-specific component CbiM of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.630
GACE_0074
Arsenical-resistance protein ACR3.
       0.572
GACE_0072
Geranylgeranyl reductase; Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3- diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di- O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains.
  
    0.566
GACE_1760
Sodium/hydrogen exchanger family protein.
  
    0.546
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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