Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GACE_0171Putative pyridine nucleotide-disulfide oxidoreductase. (437 aa)    
Predicted Functional Partners:
GACE_1093
Ferredoxin--nitrite reductase.
 
 0.932
GACE_1356
4Fe-4S ferredoxin.
 
  
  0.919
GACE_1887
Pyridine nucleotide-disulfide oxidoreductase.
  
  
 
0.903
GACE_0533
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
    
  0.902
GACE_1484
Rubredoxin-oxygen oxidoreductase.
    
 0.753
GACE_0617
Sarcosine oxidase beta subunit.
  
 
 0.733
GACE_0170
DNA polymerase, bacteriophage-type.
       0.674
rps5
SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.
  
 
 0.587
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
   0.562
GACE_0534
Hypothetical protein.
  
    0.522
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.