STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCVapC toxin protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (132 aa)    
Predicted Functional Partners:
GACE_0186
Hypothetical protein.
       0.775
GACE_0185
Hypothetical protein.
       0.515
GACE_1433
Hypothetical protein.
 
   
 0.510
GACE_0080
Hypothetical protein.
 
   
 0.480
GACE_1284
Hypothetical protein.
 
   
 0.480
GACE_1252
Hypothetical protein.
 
     0.452
GACE_1641
Hypothetical protein.
 
  
 0.436
GACE_0340
Type I restriction-modification system, DNA-methyltransferase subunit M.
 
  
 0.406
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.