Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GACE_0465Formylmethanofuran dehydrogenase subunit B. (417 aa)    
Predicted Functional Partners:
GACE_0463
Formylmethanofuran dehydrogenase subunit C.
 
 0.999
GACE_0464
Formylmethanofuran dehydrogenase subunit A.
 
 0.999
GACE_0466
Formylmethanofuran dehydrogenase subunit D.
 
 
 0.999
ftr
Tetrahydromethanopterin formyl transferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
 
 0.994
GACE_0362
Formylmethanofuran dehydrogenase subunit G.
 
 
  0.990
GACE_0426
Tetrahydromethanopterin formyl transferase.
 
 
 0.989
GACE_1882
Formylmethanofuran dehydrogenase subunit F.
 
 0.986
GACE_0360
Formylmethanofuran dehydrogenase subunit D.
   
 0.985
GACE_0528
Formylmethanofuran dehydrogenase subunit F.
 
 0.982
GACE_0361
Formylmethanofuran dehydrogenase subunit B.
  
  
 
0.917
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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