Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GACE_0571Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (112 aa)    
Predicted Functional Partners:
GACE_0570
Ammonium transporter.
 
 
 0.993
GACE_1653
Ammonium transporter.
 
 
 0.972
GACE_0277
Glutamine synthetase type I.
 
 
 0.932
GACE_1652
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
  
 
0.901
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
   
 
 0.793
GACE_0118
Hypothetical protein.
   
 
 0.786
GACE_0968
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
   
 
 0.713
GACE_0088
Putative ADP-ribosylglycohydrolase.
   
 
 0.620
GACE_0962
ADP-ribosylglycohydrolase.
   
 
 0.620
GACE_1965
Histidine kinase.
  
  
 0.560
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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