Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GACE_0705Amino acid-binding ACT protein. (219 aa)    
Predicted Functional Partners:
GACE_0704
Transcriptional regulator, AsnC family.
       0.944
htpX
Heat shock protein (htpX); Belongs to the peptidase M48B family.
  
    0.874
GACE_1786
Uroporphyrinogen-III synthase.
  
    0.780
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
 
    0.778
GACE_2067
Hypothetical protein.
  
    0.775
GACE_0711
Methylviologen-reducing hydrogenase, subunit alpha (MvhA).
     
 0.667
GACE_0706
CoB--CoM heterodisulfide reductase subunit A.
     
 0.661
GACE_0422
NADP-dependent malic enzyme.
  
    0.657
mtd
Methylenetetrahydromethanopterin dehydrogenase; Catalyzes the oxidation of methylene-H(4)MPT to methenyl- H(4)MPT(+).
  
     0.650
GACE_0708
CoB--CoM heterodisulfide reductase subunit B.
     
 0.650
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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