STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GACE_0769acetyl-CoA synthetase. (197 aa)    
Predicted Functional Partners:
GACE_0768
acetyl-CoA synthetase.
 
 0.999
GACE_0133
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative.
 
 
0.973
GACE_0687
2-oxoacid ferredoxin oxidoreductase, subunit alpha.
  
 0.930
GACE_0093
3-ketoacyl-CoA thiolase.
  
 
 0.916
GACE_0686
2-oxoacid ferredoxin oxidoreductase, subunit beta.
    
 0.916
GACE_0723
3-ketoacyl-CoA thiolase.
  
 
 0.916
GACE_0766
3-ketoacyl-CoA thiolase.
  
 
 0.916
GACE_0794
acetyl-CoA acetyltransferase.
  
 
 0.916
GACE_0921
acetyl-CoA synthetase.
    
 0.916
GACE_1175
3-ketoacyl-CoA thiolase.
  
 
 0.916
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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