STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GACE_07772-hydroxycyclohexane-1-carboxyl-CoA dehydrogenase, BadH. (251 aa)    
Predicted Functional Partners:
GACE_0789
2-ketocyclohexane-carboxyl-CoA hydrolase, BadI.
 
 
 0.943
GACE_1600
DNA double-strand break repair protein Mre11.
  
 
 0.863
GACE_1965
Histidine kinase.
  
 
 0.829
GACE_0009
F420H2-quinone oxidoreductase, subunit N.
  
 
 0.807
GACE_0010
F420H2-quinone oxidoreductase, subunit A.
  
 
 0.796
GACE_0012
F420H2-quinone oxidoreductase, subunit D.
  
 
 0.787
GACE_0011
F420H2-quinone oxidoreductase, subunit BC (fused).
  
 
 0.779
GACE_0013
F420H2-quinone oxidoreductase, subunit H.
  
 
 0.779
GACE_0014
F420H2-quinone oxidoreductase, subunit I.
   
 
 0.754
GACE_0802
Ferredoxin.
   
 
 0.754
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.