STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GACE_0795Putative dehydrogenase subunit. (362 aa)    
Predicted Functional Partners:
GACE_1881
Heterodisulfide reductase, subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
  
 
 0.951
GACE_0101
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.948
GACE_1343
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.948
GACE_2073
Cytochrome C oxidase.
  
 
 0.935
GACE_0276
Glutamate synthase domain 2; Belongs to the glutamate synthase family.
  
  
 0.934
GACE_0015
Coenzyme F420-reducing hydrogenase, beta subunit.
  
 
 0.894
GACE_0716
Hydrogenase (NiFe), b-type cytochrome subunit.
  
 
 0.859
GACE_1222
MolR family transcriptional regulator.
     
 0.828
GACE_0464
Formylmethanofuran dehydrogenase subunit A.
  
 
 0.818
GACE_0463
Formylmethanofuran dehydrogenase subunit C.
  
 
 0.814
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.