Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
GACE_0928Na /H antiporter (napA-1). (372 aa)    
Predicted Functional Partners:
GACE_0927
Hypothetical protein.
  
  
 0.926
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
       0.923
GACE_0929
Trk system potassium uptake protein TrkA.
     
 0.863
GACE_0931
CoB--CoM heterodisulfide reductase subunit B.
       0.679
GACE_0932
CoB--CoM heterodisulfide reductase subunit C.
       0.644
GACE_0933
Isocitrate dehydrogenase (NADP-dependent).
       0.513
GACE_0545
Na /H antiporter.
 
 
 
 0.469
GACE_0962
ADP-ribosylglycohydrolase.
 
  
 0.447
GACE_1369
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
 
   
 0.438
GACE_1759
trkA domain protein.
  
  
 0.433
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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